- data - Variable in class com.emphysic.myriad.core.data.io.Dataset
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The array that backs the contents of the dataset.
- Data(int, int) - Constructor for class com.emphysic.myriad.core.ml.CrossValidation.Data
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- Data(double[][], int[]) - Constructor for class com.emphysic.myriad.core.ml.CrossValidation.Data
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- DataIngestorActor - Class in com.emphysic.myriad.network
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DataIngestorActor - Akka actor for reading data files
- DataIngestorActor(boolean) - Constructor for class com.emphysic.myriad.network.DataIngestorActor
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Constructor
- DataIngestorActor() - Constructor for class com.emphysic.myriad.network.DataIngestorActor
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Default constructor.
- DataIngestorPool - Class in com.emphysic.myriad.network
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DataIngestorPool - a linked pool for reading Dataset input files.
- DataIngestorPool(int, boolean) - Constructor for class com.emphysic.myriad.network.DataIngestorPool
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Creates a new pool.
- DataIngestorPool(Pool, boolean) - Constructor for class com.emphysic.myriad.network.DataIngestorPool
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Creates a new pool from an existing pool.
- DataIngestorPool(boolean) - Constructor for class com.emphysic.myriad.network.DataIngestorPool
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Starts a new pool with the default number of workers.
- DataIngestorPool(int) - Constructor for class com.emphysic.myriad.network.DataIngestorPool
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Creates a new pool.
- DataIngestorPool(Pool) - Constructor for class com.emphysic.myriad.network.DataIngestorPool
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Creates a new pool from an existing pool.
- DataIngestorPool() - Constructor for class com.emphysic.myriad.network.DataIngestorPool
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Starts a new pool with the default number of workers.
- Dataset - Class in com.emphysic.myriad.core.data.io
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Dataset-the fundamental data type in Myriad.
- Dataset(int, int) - Constructor for class com.emphysic.myriad.core.data.io.Dataset
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Create a new initialized but empty Dataset
- Dataset(double[]) - Constructor for class com.emphysic.myriad.core.data.io.Dataset
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Create a new 1D Dataset of width data.length and height 1.
- Dataset(double[], int, int) - Constructor for class com.emphysic.myriad.core.data.io.Dataset
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Create a new 2D Dataset from an input array.
- Dataset() - Constructor for class com.emphysic.myriad.core.data.io.Dataset
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Create a new uninitialized Dataset.
- Dataset(Dataset) - Constructor for class com.emphysic.myriad.core.data.io.Dataset
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Create a new Dataset from an original.
- dataset - Variable in class com.emphysic.myriad.core.data.roi.ROI
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The underlying data that represents a region of interest
- dataset - Variable in class com.emphysic.myriad.network.messages.DatasetMessage
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Dataset payload
- DatasetActor - Class in com.emphysic.myriad.network
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DatasetActor - Akka actor that performs a DatasetOperation on a Dataset.
- DatasetActor(DatasetOperation) - Constructor for class com.emphysic.myriad.network.DatasetActor
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Creates a new DatasetActor with a DatasetOperation
- DatasetMessage - Class in com.emphysic.myriad.network.messages
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DatasetMessage - immutable message for transmitting a Dataset payload
- DatasetMessage(Dataset, String) - Constructor for class com.emphysic.myriad.network.messages.DatasetMessage
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Creates a new DatasetMessage
- DatasetMessage(Dataset) - Constructor for class com.emphysic.myriad.network.messages.DatasetMessage
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Creates a new DatasetMessage with no metadata
- DatasetMessage(DatasetMessage) - Constructor for class com.emphysic.myriad.network.messages.DatasetMessage
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Copy constructor
- DatasetMessage(DatasetMessage, String) - Constructor for class com.emphysic.myriad.network.messages.DatasetMessage
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Creates a copy of a DatasetMessage with additional metadata
- DatasetOperation - Interface in com.emphysic.myriad.core.data.ops
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DatasetOperation - an operation on Datasets that returns a resultant Dataset.
- DatasetOperationPool - Class in com.emphysic.myriad.network
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DatasetOperationPool - linked worker pool for performing operations on Datasets.
- DatasetOperationPool(int, DatasetOperation) - Constructor for class com.emphysic.myriad.network.DatasetOperationPool
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Creates a new pool with the specified number of workers.
- DatasetOperationPool(Pool, DatasetOperation) - Constructor for class com.emphysic.myriad.network.DatasetOperationPool
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Creates a new pool from an existing one
- DatasetOperationPool(DatasetOperation) - Constructor for class com.emphysic.myriad.network.DatasetOperationPool
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Starts a new pool to perform the specified operation.
- DatasetUtils - Class in com.emphysic.myriad.core.data.util
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DatasetUtils - general purpose Dataset utility functions
- DatasetUtils() - Constructor for class com.emphysic.myriad.core.data.util.DatasetUtils
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- decodeData(String) - Method in class com.emphysic.myriad.core.data.roi.RESTROIFinder
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Decodes a Base64 string into its input array
- DEFAULTWORKERS - Static variable in class com.emphysic.myriad.network.WorkerPool
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Default number of workers in a pool
- delArgument(String) - Method in class com.emphysic.myriad.core.data.util.ExternalProcess
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Removes a command line argument if it exists.
- delDICOMExtension(String) - Method in class com.emphysic.myriad.core.data.util.FileSniffer
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Removes a DICOM/DICONDE extension if present.
- delEnvironmentVariable(String) - Method in class com.emphysic.myriad.core.data.util.ExternalProcess
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Removes an environment variable if it exists.
- delImageExtension(String) - Method in class com.emphysic.myriad.core.data.util.FileSniffer
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Removes an image file extension if present.
- delTextExtension(String) - Method in class com.emphysic.myriad.core.data.util.FileSniffer
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Removes a text file extension if present
- descriptors(Dataset) - Method in class com.emphysic.myriad.core.data.ops.HOGOperation
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Computes the normalized HOG descriptors for the specified input
- DicomDataset - Class in com.emphysic.myriad.core.data.io
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DicomDataset - ImageDataset read from DICOM/DICONDE input files.
- DicomDataset(String) - Constructor for class com.emphysic.myriad.core.data.io.DicomDataset
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Creates a new DicomDataset from the specified file
- DicomDataset(File) - Constructor for class com.emphysic.myriad.core.data.io.DicomDataset
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Creates a new DicomDataset from the specified file
- DifferenceOfGaussiansOperation - Class in com.emphysic.myriad.core.data.ops
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DifferenceOfGaussiansOperation - performs the Difference of Gaussians (DOG) operation on an input.
- DifferenceOfGaussiansOperation(BlurOperation, BlurOperation) - Constructor for class com.emphysic.myriad.core.data.ops.DifferenceOfGaussiansOperation
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Creates a new DOGOperation with the specified blur operations.
- DifferenceOfGaussiansOperation(int, int) - Constructor for class com.emphysic.myriad.core.data.ops.DifferenceOfGaussiansOperation
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Creates a new DOGOperation with two GaussianBlurOperations.
- DifferenceOfGaussiansOperation() - Constructor for class com.emphysic.myriad.core.data.ops.DifferenceOfGaussiansOperation
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Creates a new DOGOperation with blur radii of 1 and 2.
- dog(Dataset) - Static method in class com.emphysic.myriad.core.examples.EdgeDetection
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Performs Difference of Gaussian (DOG) edge detection (technically more of a feature enhancer) on a dataset
https://en.wikipedia.org/wiki/Difference_of_Gaussians